yomS [2019-11-11 15:39:45]

similar to phage-related lytic exoenzyme

locus: BSU_21240

pI: 4.33

mw: 12.76 kDa

protein length: 118 aa

gene length: 357 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 5|Prophages and mobile genetic elements] → [category|SW 5.1|Prophages] → [category|SW 5.1.2|SP-beta prophage]

Gene

Coordinates: 2,242,056 2,242,412

The protein

Paralogous protein(s)

• [protein|D55168C206F2B6B79F9F8FCA90A757F6CCE39849|YqxG]: 33% identity to the C-terminal part of [protein|D55168C206F2B6B79F9F8FCA90A757F6CCE39849|YqxG]
• [protein|27BB6659541BA5368DEDB19EADCD372CE41244F5|XepA]: 38% identity to the C-terminal part of [protein|27BB6659541BA5368DEDB19EADCD372CE41244F5|XepA]

Biological materials

Mutant

• BKE21240 ([gene|4F4F48730C97FBEEEAE6B4080D2DD324C575633E|yomS]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE21240 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAACAACTCCACCTCCTTAA, downstream forward: _UP4_GTTAAAGGGATTGTGGTGAG
• BKK21240 ([gene|4F4F48730C97FBEEEAE6B4080D2DD324C575633E|yomS]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK21240 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAACAACTCCACCTCCTTAA, downstream forward: _UP4_GTTAAAGGGATTGTGGTGAG

References

Research papers

• 31692476